Detailed information of matrix profile MA0867.2

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Profile summary
Name: SOX4
Matrix ID: MA0867.2
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17599239
Uniprot ID: Q06945  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 480 174 83 2719 0 0 33 9 431 2286 ]
C [ 1889 3489 5582 50 11 6 37 0 2047 5582 ]
G [ 1438 1422 64 120 6 1 5582 0 951 1771 ]
T [ 1775 2093 1018 5582 5582 5582 0 5582 5582 3190 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0867.1 MA0867 1 SOX4 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
MA0867.2 MA0867 2 SOX4 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
MA0867.3 MA0867 3 SOX4 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: