Detailed information of matrix profile MA0872.1

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Profile summary
Name: TFAP2A
Matrix ID: MA0872.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16420676
Uniprot ID: P05549  
Source: 23332764
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 262 0 0 0 48 55 188 556 192 0 0 0 721 ]
C [ 154 357 1368 1373 1115 524 506 224 66 0 0 1099 102 ]
G [ 134 1359 0 0 95 212 546 538 1420 1911 1903 366 198 ]
T [ 837 0 0 0 131 650 251 75 53 0 0 0 260 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0872.1 MA0872 1 TFAP2A Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0113.1

ChIP-seq Centrality
-log(P-value): 5777.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0113.1

ChIP-seq Centrality
-log(P-value): 5107.15

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: