Detailed information of matrix profile MA0901.1

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Profile summary
Name: HOXB13
Matrix ID: MA0901.1
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q92826  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 587 345 18 17 304 2781 104 521 691 161 ]
C [ 192 168 1 0 26 0 38 12 14 518 ]
G [ 1014 550 77 0 22 7 22 1000 2781 2781 ]
T [ 988 2781 2781 2781 2781 0 2781 2781 116 277 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0901.1 MA0901 1 HOXB13 Homo sapiens
HOX Homeo domain factors
MA0901.2 MA0901 2 HOXB13 Homo sapiens
HOX Homeo domain factors
MA0901.3 MA0901 3 HOXB13 Homo sapiens
HOX Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0180.1

ChIP-seq Centrality
-log(P-value): 5995.15

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0180.1

ChIP-seq Centrality
-log(P-value): 6079.33

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: