Detailed information of matrix profile MA0909.1

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Profile summary
Name: HOXD13
Matrix ID: MA0909.1
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P35453  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 165 56 0 4 110 688 29 94 285 55 ]
C [ 73 34 0 0 0 0 27 0 4 294 ]
G [ 207 75 1 3 0 1 0 347 403 688 ]
T [ 243 688 688 688 688 0 688 688 12 50 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0909.1 MA0909 1 HOXD13 Homo sapiens
HOX Homeo domain factors
MA0909.2 MA0909 2 HOXD13 Homo sapiens
HOX Homeo domain factors
MA0909.3 MA0909 3 Hoxd13 Mus musculus
HOX Homeo domain factors
MA0909.4 MA0909 4 Hoxd13 Mus musculus
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: