Detailed information of matrix profile MA1006.1

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Profile summary
Name: ERF6
Matrix ID: MA1006.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 9756931
Uniprot ID: Q8VZ91  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 291 78 0 0 0 0 0 0 159 172 ]
C [ 352 221 0 1000 1000 0 88 1000 156 278 ]
G [ 179 166 1000 0 0 1000 912 0 530 257 ]
T [ 179 535 0 0 0 0 0 0 155 294 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1006.1 MA1006 1 ERF6 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1006.2 MA1006 2 ERF6 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: