Detailed information of matrix profile MA1104.1

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Profile summary
Name: GATA6
Matrix ID: MA1104.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8321207
Uniprot ID: Q92908  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 5342 6098 5177 16088 210 18250 327 17543 17864 952 12541 6323 6957 ]
C [ 3899 2976 5000 229 102 122 139 186 79 1788 1873 3098 3369 ]
G [ 4256 4600 5168 221 18286 154 262 205 345 15490 3554 4465 3798 ]
T [ 5153 4976 3305 2112 52 124 17922 716 362 420 682 4764 4526 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1104.1 MA1104 1 GATA6 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
MA1104.2 MA1104 2 GATA6 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
MA1104.3 MA1104 3 GATA6 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0137.1

ChIP-seq Centrality
-log(P-value): 11283.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0137.1

ChIP-seq Centrality
-log(P-value): 11080.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: