Detailed information of matrix profile MA1203.1

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Profile summary
Name: AGL63
Matrix ID: MA1203.1
Class: MADS box factors
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: Q9SA07  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 86 36 60 2 11 371 130 139 55 98 37 43 10 276 461 ]
C [ 28 2 20 591 522 24 27 1 0 33 81 0 0 194 39 ]
G [ 10 13 235 0 0 100 28 1 0 9 35 544 579 33 6 ]
T [ 473 546 282 4 64 102 412 456 542 457 444 10 8 94 91 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1203.1 MA1203 1 AGL63 Arabidopsis thaliana
MIKC MADS box factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0220.1

ChIP-seq Centrality
-log(P-value): 31309.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0220.1

ChIP-seq Centrality
-log(P-value): 31859.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: