Detailed information of matrix profile MA1206.1

  1. Home
  2. Matrix > MA1206.1

Profile summary
Name: ARF2
Matrix ID: MA1206.1
Class: B3
Family: ARF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25002510
Uniprot ID: Q94JM3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 86 140 0 0 0 0 0 0 194 188 ]
C [ 207 131 0 0 40 487 15 204 193 50 ]
G [ 87 57 37 599 0 0 384 395 61 116 ]
T [ 219 271 562 0 559 112 200 0 151 245 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1206.1 MA1206 1 ARF2 Arabidopsis thaliana
ARF B3
MA1206.2 MA1206 2 ARF2 Arabidopsis thaliana
ARF B3
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0227.1

ChIP-seq Centrality
-log(P-value): 5754.53

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0227.1

ChIP-seq Centrality
-log(P-value): 5533.85

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: