Detailed information of matrix profile MA1351.1

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Profile summary
Name: GBF3
Matrix ID: MA1351.1
Class: Basic leucine zipper factors (bZIP)
Family: Group G
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 9680995
Uniprot ID: Q42510  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 36 2 84 0 596 0 3 0 50 392 36 161 304 187 169 ]
C [ 92 1 512 596 0 593 2 0 374 0 166 394 72 114 169 ]
G [ 39 532 0 0 0 3 591 0 170 134 251 12 39 67 54 ]
T [ 429 61 0 0 0 0 0 596 2 70 143 29 181 228 204 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1351.1 MA1351 1 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1351.2 MA1351 2 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1351.3 MA1351 3 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0345.1

ChIP-seq Centrality
-log(P-value): 17756.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0345.1

ChIP-seq Centrality
-log(P-value): 17806.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: