Detailed information of matrix profile MA1389.1

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Profile summary
Name: PHL1
Matrix ID: MA1389.1
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8GUN5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 269 178 127 183 0 497 599 0 540 0 44 15 38 95 43 ]
C [ 101 44 125 154 1 43 1 0 59 0 25 545 188 105 85 ]
G [ 76 61 122 263 597 14 0 1 1 0 49 2 49 66 87 ]
T [ 154 317 226 0 2 46 0 599 0 600 482 38 325 334 385 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1389.1 MA1389 1 PHL1 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1389.2 MA1389 2 PHL1 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0276.1

ChIP-seq Centrality
-log(P-value): 11649.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0276.1

ChIP-seq Centrality
-log(P-value): 11602.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: