Detailed information of matrix profile UN0082.1

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Profile summary

Name: HCAG_04779
Matrix ID: UN0082.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Fungi
Species: Histoplasma capsulatum
Data Type: PBM
Validation:
Uniprot ID: A6R571  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 250 116 851 9 0 0 2 9 574 279 ]
C [ 126 218 122 2 998 997 84 963 151 233 ]
G [ 193 516 5 981 0 1 533 2 141 151 ]
T [ 429 149 20 5 1 0 379 23 132 334 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0082.1 UN0082 1 HCAG_04779 Histoplasma capsulatum
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0082.2 UN0082 2 HCAG_04779 Histoplasma capsulatum
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: