Detailed information of matrix profile UN0094.1

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Profile summary

Name: NCU06487
Matrix ID: UN0094.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation:
Uniprot ID: Q7RYI7  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 320 132 26 351 0 6 27 75 247 349 ]
C [ 162 152 0 561 4 0 920 14 433 243 ]
G [ 254 175 960 80 992 992 13 250 208 165 ]
T [ 262 538 12 6 3 1 38 659 110 241 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0094.1 UN0094 1 NCU06487 Neurospora crassa
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0094.2 UN0094 2 NCU06487 Neurospora crassa
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: