Detailed information of matrix profile UN0097.1

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Profile summary

Name: sub-1
Matrix ID: UN0097.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: UNVALIDATED
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation:
Uniprot ID: V5IL92  
Source: 31133749
Comment:

Sequence logo

Frequency matrix

         
A [ 224 203 225 0 999 0 0 0 347 144 225 ]
C [ 326 299 724 0 0 0 999 0 117 144 324 ]
G [ 224 391 24 999 0 0 0 897 509 144 225 ]
T [ 224 105 24 0 0 999 0 102 25 567 225 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0097.1 UN0097 1 sub-1 Neurospora crassa
C4-GATA-related Other C4 zinc finger-type factors
UN0097.2 UN0097 2 sub-1 Neurospora crassa
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: