Detailed information of matrix profile UN0108.1

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Profile summary

Name: Dsp1
Matrix ID: UN0108.1
Class: High-mobility group (HMG) domain factors
Family:
Collection: UNVALIDATED
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation:
Uniprot ID: Q24537  
Source: 30445619
Comment: Has a HMG-box DBD but likely to bind through other protein (Su(Hw))

Sequence logo

Frequency matrix

         
A [ 394 94 398 59 1053 67 167 21 965 16 1027 57 252 83 408 237 474 ]
C [ 217 136 398 9 7 12 758 6 9 4 21 428 67 60 415 202 232 ]
G [ 110 791 156 1002 10 993 83 1047 100 1051 16 404 739 915 183 491 262 ]
T [ 357 57 126 8 8 6 70 4 4 7 14 189 20 20 72 148 110 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0108.1 UN0108 1 Dsp1 Drosophila melanogaster
High-mobility group (HMG) domain factors
UN0108.2 UN0108 2 Dsp1 Drosophila melanogaster
TOX-related High-mobility group (HMG) domain factors
     

-log(P-value) = 478.727

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: