Detailed information of matrix profile UN0501.1

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Profile summary

Name: ELK1::PAX5
Matrix ID: UN0501.1
Class: Tryptophan cluster factors::Paired box factors
Family: Ets-related::Paired domain only
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P19419   Q02548  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 4742 298 131 2 0 6562 6524 10 3 6280 157 282 1 3037 250 50 6100 1323 552 1931 ]
C [ 658 5856 6557 0 0 1 2 6337 2360 42 5995 33 6221 946 1713 3614 79 2589 2754 194 ]
G [ 1770 494 0 6563 6562 0 15 385 0 593 2 6533 972 280 0 2906 1350 1667 243 5371 ]
T [ 554 83 2 1 2 6 217 341 4203 39 986 2 6 2843 4752 190 12 984 5214 795 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0501.1 UN0501 1 ELK1::PAX5 Homo sapiens
Ets-related::Paired domain only Tryptophan cluster factors::Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: