Detailed information of matrix profile UN0578.1

  1. Home
  2. Matrix > UN0578.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: POU2F1::ELK1
Matrix ID: UN0578.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: POU domain factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14859   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 104 63 21 0 436 82 436 21 0 0 26 30 0 ]
C [ 0 87 9 436 17 8 0 12 436 436 20 69 53 ]
G [ 147 13 436 0 43 0 4 2 229 0 436 436 150 ]
T [ 185 436 59 0 0 436 132 436 196 21 0 40 236 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0578.1 UN0578 1 POU2F1::ELK1 Homo sapiens
POU domain factors::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: