JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0666.3 MSX1 Homo sapiens Homeo domain factors NK
MA0667.1 MYF6 Homo sapiens Basic helix-loop-helix factors (bHLH) MyoD/ASC-related factors
MA0668.1 NEUROD2 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA0668.2 Neurod2 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA0668.3 Neurod2 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA0669.1 NEUROG2 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA0670.1 NFIA Homo sapiens SMAD/NF-1 DNA-binding domain factors Nuclear factor 1
MA0670.2 NFIA Homo sapiens SMAD/NF-1 DNA-binding domain factors Nuclear factor 1
MA0671.1 NFIX Homo sapiens SMAD/NF-1 DNA-binding domain factors Nuclear factor 1
MA0671.2 NFIX Homo sapiens SMAD/NF-1 DNA-binding domain factors Nuclear factor 1
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.