Detailed information of matrix profile MA0668.1

  1. Home
  2. Matrix > MA0668.1

Profile summary
Name: NEUROD2
Matrix ID: MA0668.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 22445365
Uniprot ID: Q15784  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 604 527 0 1587 0 1587 0 0 0 209 ]
C [ 119 875 1587 0 156 120 328 0 373 592 ]
G [ 769 240 95 308 0 38 0 1587 705 101 ]
T [ 95 0 0 52 1587 4 1587 112 548 685 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0668.1 MA0668 1 NEUROD2 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA0668.2 MA0668 2 Neurod2 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
MA0668.3 MA0668 3 Neurod2 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0533.1

ChIP-seq Centrality
-log(P-value): 39463.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0533.1

ChIP-seq Centrality
-log(P-value): 40051.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: