JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1487.1 FOXE1 Homo sapiens Fork head/winged helix factors FOX
MA1487.2 FOXE1 Homo sapiens Fork head/winged helix factors FOX
MA1487.3 FOXE1 Homo sapiens Fork head/winged helix factors FOX
MA1489.1 FOXN3 Homo sapiens Fork head/winged helix factors FOX
MA1491.1 GLI3 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1491.2 GLI3 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1491.3 GLI3 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1493.1 HES6 Homo sapiens Basic helix-loop-helix factors (bHLH) Hairy-related factors
MA1494.1 HNF4A Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA1494.2 HNF4A Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
Showing 10 profiles of page 286 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.