Detailed information of matrix profile MA0644.1

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Profile summary
Name: ESX1
Matrix ID: MA0644.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q8N693  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 10665 6473 2884 35623 35623 756 3721 35623 12065 7586 ]
C [ 8153 15223 17981 3018 2440 995 4545 477 7659 14583 ]
G [ 9485 5362 472 3416 867 4 1274 449 10210 6231 ]
T [ 7321 8564 17642 2400 1089 35623 35623 2501 5689 7223 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0644.1 MA0644 1 ESX1 Homo sapiens
Paired-related HD factors Homeo domain factors
MA0644.2 MA0644 2 ESX1 Homo sapiens
Paired-related HD factors Homeo domain factors
MA0644.3 MA0644 3 ESX1 Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: