Detailed information of matrix profile MA0790.2

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Profile summary
Name: POU4F1
Matrix ID: MA0790.2
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18077589
Uniprot ID: Q01851  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 153 1032 1720 2950 91 2811 2915 465 390 2825 3181 276 ]
C [ 236 376 1661 47 15 102 124 106 72 668 36 359 ]
G [ 125 3857 29 25 15 145 144 129 262 696 54 220 ]
T [ 3553 750 76 139 3511 1316 638 3201 3218 1116 15 3102 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0790.1 MA0790 1 POU4F1 Homo sapiens
POU domain factors Homeo domain factors
MA0790.2 MA0790 2 POU4F1 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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