Detailed information of matrix profile MA1015.1

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Profile summary
Name: GATA12
Matrix ID: MA1015.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 12504119
Uniprot ID: P69781  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 190 599 189 968 7 6 59 382 ]
C [ 282 112 67 2 22 738 230 146 ]
G [ 146 230 738 22 2 67 112 282 ]
T [ 382 59 6 7 968 189 599 190 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1015.1 MA1015 1 GATA12 Arabidopsis thaliana
C4-GATA-related Other C4 zinc finger-type factors
MA1015.2 MA1015 2 GATA12 Arabidopsis thaliana
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: