Detailed information of matrix profile MA1151.2

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Profile summary
Name: RORC
Matrix ID: MA1151.2
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 25500868
Uniprot ID: P51449  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 855 527 225 43 623 5 36 59 6 785 ]
C [ 14 10 249 87 24 2 3 112 822 12 ]
G [ 11 32 277 116 343 919 952 168 19 161 ]
T [ 120 431 249 753 11 74 8 661 153 42 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1151.1 MA1151 1 RORC Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA1151.2 MA1151 2 RORC Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: