Detailed information of matrix profile MA1205.1

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Profile summary
Name: AGL6
Matrix ID: MA1205.1
Class: MADS box factors
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: P29386  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 83 72 200 11 1 253 347 467 422 385 206 128 0 295 441 432 247 256 237 ]
C [ 8 1 8 465 394 92 8 0 0 18 49 0 0 71 4 4 61 27 41 ]
G [ 5 8 67 5 0 39 42 2 0 23 34 353 482 13 3 9 113 46 26 ]
T [ 386 401 207 1 87 98 85 13 60 56 193 1 0 103 34 37 61 153 178 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1205.1 MA1205 1 AGL6 Arabidopsis thaliana
MIKC MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: