Detailed information of matrix profile MA1207.2

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Profile summary
Name: GT-3a
Matrix ID: MA1207.2
Class: Tryptophan cluster factors
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10437822
Uniprot ID: Q9SDW0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 11 371 0 0 0 0 54 106 183 204 259 107 130 80 ]
C [ 360 0 328 0 0 0 40 82 15 66 4 64 3 42 ]
G [ 0 0 0 371 0 324 76 57 40 14 0 4 104 36 ]
T [ 0 0 43 0 371 47 201 126 133 87 108 196 134 213 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1207.1 MA1207 1 GT-3a Arabidopsis thaliana
Trihelix Tryptophan cluster factors
MA1207.2 MA1207 2 GT-3a Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: