Detailed information of matrix profile MA1387.1

  1. Home
  2. Matrix > MA1387.1

Profile summary
Name: HRS1
Matrix ID: MA1387.1
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FX67  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 234 126 260 392 101 132 144 423 548 0 596 0 25 0 43 ]
C [ 85 66 70 48 71 302 101 32 0 0 0 0 22 596 250 ]
G [ 129 290 92 45 34 97 250 61 20 405 0 0 4 0 28 ]
T [ 148 114 174 111 390 65 101 80 28 191 0 596 545 0 275 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1387.1 MA1387 1 HRS1 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1387.2 MA1387 2 HRS1 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: