| Name: | CTCF |
| Matrix ID: | MA1930.2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Collection: | CORE |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Validation: | 34326481 |
| Uniprot ID: | P49711 |
| Source: | ReMap |
| Comment: | TF has several motif variants. Extended motif with zinc finger 8 (6bp) |
| A [ | 293 | 242 | 41 | 86 | 1986 | 445 | 158 | 346 | 453 | 497 | 714 | 536 | 467 | 664 | 563 | 593 | 452 | 560 | 604 | 178 | 38 | 1906 | 127 | 348 | 2179 | 32 | 1140 | 169 | 62 | 119 | 335 | 1021 | 279 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1497 | 107 | 35 | 2129 | 127 | 366 | 278 | 324 | 1333 | 1129 | 794 | 855 | 1138 | 604 | 730 | 902 | 781 | 458 | 300 | 2074 | 2515 | 97 | 1409 | 1016 | 54 | 9 | 14 | 71 | 14 | 138 | 1833 | 164 | 1307 | ] |
| G [ | 400 | 144 | 2476 | 25 | 155 | 1456 | 179 | 892 | 328 | 419 | 623 | 770 | 561 | 376 | 541 | 494 | 393 | 1041 | 1242 | 155 | 9 | 275 | 961 | 175 | 212 | 2527 | 1399 | 1208 | 2472 | 2117 | 86 | 1161 | 740 | ] |
| T [ | 386 | 2083 | 24 | 336 | 308 | 309 | 1961 | 1014 | 462 | 531 | 445 | 415 | 410 | 932 | 742 | 587 | 950 | 517 | 430 | 169 | 14 | 298 | 79 | 1037 | 131 | 8 | 23 | 1128 | 28 | 202 | 322 | 230 | 250 | ] |
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1930.1 | MA1930 | 1 | CTCF |
Homo sapiens
|
More than 3 adjacent zinc fingers | C2H2 zinc finger factors |  |
| MA1930.2 | MA1930 | 2 | CTCF |
Homo sapiens
|
More than 3 adjacent zinc fingers | C2H2 zinc finger factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: