Detailed information of matrix profile UN0474.1

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Profile summary

Name: xBP-c
Matrix ID: UN0474.1
Class: Basic leucine zipper factors (bZIP)
Family: XBP-1-related factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 237 249 273 255 270 241 221 753 12 967 5 19 15 237 488 166 217 257 252 252 ]
C [ 260 257 246 262 224 171 126 205 892 7 982 17 27 387 99 345 397 309 290 284 ]
G [ 259 254 247 254 266 346 390 26 13 22 5 957 9 298 153 189 152 212 224 218 ]
T [ 245 240 235 230 240 242 262 16 83 4 8 7 950 78 259 300 234 223 234 246 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0474.1 UN0474 1 xBP-c Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
UN0474.2 UN0474 2 xBP-c Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: