Detailed information of matrix profile UN0474.1

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Profile summary

Name: xBP-c
Matrix ID: UN0474.1
Class: Basic leucine zipper factors (bZIP)
Family: XBP-1-related factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 246 234 223 234 300 259 78 950 7 8 4 83 16 262 242 240 230 235 240 245 ]
C [ 218 224 212 152 189 153 298 9 957 5 22 13 26 390 346 266 254 247 254 259 ]
G [ 284 290 309 397 345 99 387 27 17 982 7 892 205 126 171 224 262 246 257 260 ]
T [ 252 252 257 217 166 488 237 15 19 5 967 12 753 221 241 270 255 273 249 237 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0474.1 UN0474 1 xBP-c Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
UN0474.2 UN0474 2 xBP-c Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: