Detailed information of matrix profile UN0503.1

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Profile summary

Name: ELK1::SPDEF
Matrix ID: UN0503.1
Class: Tryptophan cluster factors::Tryptophan cluster factors
Family: Ets-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95238   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1466 1286 1769 0 6 5864 90 3477 35 1141 163 1140 10 46 16 0 326 717 ]
C [ 1788 3797 4071 6 2 4 795 62 25 5665 5861 98 73 5865 5860 118 889 1235 ]
G [ 1348 1257 53 5866 5866 15 153 1809 14 329 65 4520 64 26 25 3872 4436 1888 ]
T [ 1265 158 9 1 0 6 4829 2064 5857 247 267 3203 5834 73 118 1993 1009 2026 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0503.1 UN0503 1 ELK1::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
UN0503.2 UN0503 2 ELK1::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: