Detailed information of matrix profile UN0503.1

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Profile summary

Name: ELK1::SPDEF
Matrix ID: UN0503.1
Class: Tryptophan cluster factors::Tryptophan cluster factors
Family: Ets-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95238   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2026 1009 1993 118 73 5834 3203 267 247 5857 2064 4829 6 0 1 9 158 1265 ]
C [ 1888 4436 3872 25 26 64 4520 65 329 14 1809 153 15 5866 5866 53 1257 1348 ]
G [ 1235 889 118 5860 5865 73 98 5861 5665 25 62 795 4 2 6 4071 3797 1788 ]
T [ 717 326 0 16 46 10 1140 163 1141 35 3477 90 5864 6 0 1769 1286 1466 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0503.1 UN0503 1 ELK1::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
UN0503.2 UN0503 2 ELK1::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: