Detailed information of matrix profile UN0521.1

  1. Home
  2. Matrix > UN0521.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ETV2::SREBF2
Matrix ID: UN0521.1
Class: Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
Family: Ets-related::bHLH-ZIP
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q12772   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 202 79 53 250 5 24 13 3 363 0 7 3 363 332 198 30 ]
C [ 158 37 310 6 363 6 46 0 15 363 1 1 0 45 71 116 ]
G [ 161 19 334 113 141 363 9 363 32 0 363 363 19 18 363 45 ]
T [ 9 363 7 22 13 1 363 0 16 25 2 33 17 31 35 172 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0521.1 UN0521 1 ETV2::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
UN0521.2 UN0521 2 ETV2::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: