Detailed information of matrix profile UN0575.1

  1. Home
  2. Matrix > UN0575.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PITX1::HES7
Matrix ID: UN0575.1
Class: Homeo domain factors::Basic helix-loop-helix factors (bHLH)
Family: Paired-related HD factors::Hairy-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P78337   Q9BYE0  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 87 6 152 4 9 3 0 22 35 17 10 152 14 12 152 ]
C [ 19 152 2 152 4 19 11 18 43 10 0 0 3 3 0 ]
G [ 49 0 37 0 152 36 152 68 62 152 152 0 0 7 0 ]
T [ 0 0 70 6 0 152 9 45 13 37 5 15 152 152 4 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0575.1 UN0575 1 PITX1::HES7 Homo sapiens
Paired-related HD factors::Hairy-related factors Homeo domain factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: