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647 profile(s) found

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ID Name Species Class Family Logo
MA0036.3 GATA2 Homo sapiens
 Other C4 zinc finger-type factors C4-GATA-related
MA0036.4 GATA2 Homo sapiens
 Other C4 zinc finger-type factors C4-GATA-related
MA0037.2 GATA3 Homo sapiens
 Other C4 zinc finger-type factors C4-GATA-related
MA0039.2 Klf4 Mus musculus
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0039.3 KLF4 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0039.4 KLF4 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0039.5 KLF4 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0043.3 HLF Homo sapiens
 Basic leucine zipper factors (bZIP) CEBP-related
MA0043.4 HLF Homo sapiens
 Basic leucine zipper factors (bZIP) CEBP-related
MA0047.2 Foxa2 Mus musculus
 Fork head/winged helix factors FOX
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.