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129 profile(s) found

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ID Name Species Class Family Logo
MA1438.2 atf-7 Caenorhabditis briggsae
 Basic leucine zipper factors (bZIP) Jun-related
MA1439.1 elt-6 Caenorhabditis briggsae
 Other C4 zinc finger-type factors C4-GATA-related
MA1439.2 elt-6 Caenorhabditis briggsae
 Other C4 zinc finger-type factors C4-GATA-related
MA1440.1 fkh-9 Caenorhabditis briggsae
 Fork head/winged helix factors FOX
MA1441.1 lim-7 Caenorhabditis briggsae
 Homeo domain factors HD-LIM
MA1441.2 lim-7 Caenorhabditis briggsae
 Homeo domain factors HD-LIM
MA1442.1 mab-5 Caenorhabditis briggsae
 Homeo domain factors HOX
MA1443.1 unc-30 Caenorhabditis briggsae
 Homeo domain factors Paired-related HD factors
MA1443.2 unc-30 Caenorhabditis briggsae
 Homeo domain factors Paired-related HD factors
MA1444.1 cebp-1 Caenorhabditis elegans
 Basic leucine zipper factors (bZIP) CEBP-related
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Scan

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(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.