Help us improve JASPAR!
Take our survey: https://nettskjema.no/a/467839
Browse JASPAR CORE for 6 different taxonomic groups
.jpg)
About JASPAR CORE
The JASPAR CORE database contains a curated, non-redundant set of profiles, derived from published collections of experimentally defined transcription factor binding sites for eukaryotes. The prime difference to similar resources (TRANSFAC, etc.) consist of the open data access, non-redundancy and quality.
When should it be used? When seeking models for specific factors or structural classes, or if experimental evidence is paramount
The high-quality transcription factor binding profile database
Read more about JASPAR
Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Chèneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles Nucleic Acids Res. 2024 Jan 5;52(D1):D174-D182.;
doi: 10.1093/nar/gkad1059
Q&A Forum
Ask questions about JASPAR here
RESTful API
Access JASPAR database programmatically
Download
Batch download PFMs, TFFMs, sites, and more
pyJASPAR
A Pythonic interface to JASPAR motifs