JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0638.1 CREB3 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
MA0638.2 CREB3 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
MA0639.1 DBP Homo sapiens Basic leucine zipper factors (bZIP) CEBP-related
MA0639.2 DBP Homo sapiens Basic leucine zipper factors (bZIP) CEBP-related
MA0640.1 ELF3 Homo sapiens Tryptophan cluster factors Ets-related
MA0640.2 ELF3 Homo sapiens Tryptophan cluster factors Ets-related
MA0640.3 ELF3 Homo sapiens Tryptophan cluster factors Ets-related
MA0641.1 ELF4 Homo sapiens Tryptophan cluster factors Ets-related
MA0642.1 EN2 Homo sapiens Homeo domain factors NK
MA0642.2 EN2 Homo sapiens Homeo domain factors NK
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.