JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0677.2 Nr2f6 Mus musculus Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0678.1 OLIG2 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA0679.1 ONECUT1 Homo sapiens Homeo domain factors HD-CUT
MA0679.2 ONECUT1 Homo sapiens Homeo domain factors HD-CUT
MA0679.3 ONECUT1 Homo sapiens Homeo domain factors HD-CUT
MA0680.1 PAX7 Homo sapiens Paired box factors Paired plus homeo domain
MA0680.2 Pax7 Mus musculus Paired box factors Paired plus homeo domain
MA0680.3 Pax7 Mus musculus Paired box factors Paired plus homeo domain
MA0681.1 Phox2b Mus musculus Homeo domain factors Paired-related HD factors
MA0681.2 PHOX2B Homo sapiens Homeo domain factors Paired-related HD factors
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.