JASPAR CORE

  1. Home
  2. Collection CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0784.3 POU1F1 Homo sapiens Homeo domain factors POU domain factors
MA0785.1 POU2F1 Homo sapiens Homeo domain factors POU domain factors
MA0785.2 POU2F1 Homo sapiens Homeo domain factors POU domain factors
MA0786.1 POU3F1 Homo sapiens Homeo domain factors POU domain factors
MA0786.2 POU3F1 Homo sapiens Homeo domain factors POU domain factors
MA0787.1 POU3F2 Homo sapiens Homeo domain factors POU domain factors
MA0788.1 POU3F3 Homo sapiens Homeo domain factors POU domain factors
MA0789.1 POU3F4 Homo sapiens Homeo domain factors POU domain factors
MA0790.1 POU4F1 Homo sapiens Homeo domain factors POU domain factors
MA0790.2 POU4F1 Homo sapiens Homeo domain factors POU domain factors
Showing 10 profiles of page 157 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.