Detailed information of matrix profile MA0785.1

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Profile summary
Name: POU2F1
Matrix ID: MA0785.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 1361172
Uniprot ID: P14859  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 5076 5351 756 10582 153 186 300 6932 10582 10582 1422 1976 ]
C [ 1938 1046 1347 12 501 82 10582 33 108 37 457 1840 ]
G [ 1494 2142 474 29 213 10582 1351 46 879 51 755 2504 ]
T [ 2075 5231 10582 43 10582 1326 3375 3651 787 158 10582 4262 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0785.1 MA0785 1 POU2F1 Homo sapiens
POU domain factors Homeo domain factors
MA0785.2 MA0785 2 POU2F1 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0788.1

ChIP-seq Centrality
-log(P-value): 249.876

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0788.1

ChIP-seq Centrality
-log(P-value): 260.688

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: