JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1022.2 PHYPADRAFT_38837 Physcomitrium patens Other C4 zinc finger-type factors DOF
MA1023.1 PHYPADRAFT_28324 Physcomitrium patens AP2/EREBP ERF/DREB
MA1024.1 HAT1 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1024.2 HAT1 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1025.1 HBI1 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1025.2 HBI1 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) bHLH
MA1026.1 ATHB-15 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1026.2 ATHB-15 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1026.3 ATHB-15 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1027.1 KAN1 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
Showing 10 profiles of page 201 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.