JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1406.1 ATHB-4 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1406.2 ATHB-4 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1407.1 bZIP14 Phaeodactylum tricornutum Basic leucine zipper factors (bZIP) Group A
MA1407.2 bZIP14 Phaeodactylum tricornutum Basic leucine zipper factors (bZIP) Group A
MA1408.1 FaEOBII Fragaria x ananassa Tryptophan cluster factors Myb-related
MA1408.2 FaEOBII Fragaria x ananassa Tryptophan cluster factors MYB-related
MA1409.1 OsRR22 Oryza sativa Tryptophan cluster factors GARP_ARR-B
MA1409.2 OsRR22 Oryza sativa Tryptophan cluster factors GARP_ARR-B
MA1410.1 StBRC1 Solanum lycopersicum Basic helix-loop-helix factors (bHLH) TCP
MA1410.2 StBRC1 Solanum lycopersicum TCP
Showing 10 profiles of page 273 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.