JASPAR CORE

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Total 4572 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2611.1 ereb209 Zea mays AP2/EREBP ERF/DREB
MA2612.1 ereb147 Zea mays AP2/EREBP ERF/DREB
MA2613.1 ereb34 Zea mays AP2/EREBP ERF/DREB
MA2614.1 ereb198 Zea mays AP2/EREBP ERF/DREB
MA2615.1 ereb109 Zea mays AP2/EREBP ERF/DREB
MA2616.1 ereb17 Zea mays AP2/EREBP ERF/DREB
MA2617.1 ereb54 Zea mays AP2/EREBP ERF/DREB
MA2618.1 ereb102 Zea mays AP2/EREBP ERF/DREB
MA2619.1 ereb18 Zea mays AP2/EREBP ERF/DREB
MA2620.1 g2 Zea mays Tryptophan cluster factors GARP_G2-like
Showing 10 profiles of page 443 from 458 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.