JASPAR CORE

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Total 4279 profiles

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ID Name Species Class Family Sequence logo
MA0314.3 HAP3 Saccharomyces cerevisiae Heteromeric CCAAT-binding factors Heteromeric CCAAT-binding
MA0316.1 HAP5 Saccharomyces cerevisiae Heteromeric CCAAT-binding factors Heteromeric CCAAT-binding
MA0316.2 HAP5 Saccharomyces cerevisiae Heteromeric CCAAT-binding factors Heteromeric CCAAT-binding
MA0317.1 HCM1 Saccharomyces cerevisiae Fork head/winged helix factors FOX
MA0317.2 HCM1 Saccharomyces cerevisiae Fork head/winged helix factors FOX
MA0318.1 HMRA2 Saccharomyces cerevisiae Homeo domain factors TALE-type homeo domain factors
MA0319.1 HSF1 Saccharomyces cerevisiae Heat shock factors HSF factors
MA0319.2 HSF1 Saccharomyces cerevisiae Heat shock factors HSF factors
MA0320.1 IME1 Saccharomyces cerevisiae
MA0321.1 INO2 Saccharomyces cerevisiae Basic helix-loop-helix factors (bHLH)
Showing 10 profiles of page 64 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.