JASPAR CORE

  1. Home
  2. Collection CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0366.1 RGM1 Saccharomyces cerevisiae C2H2 zinc finger factors
MA0367.1 RGT1 Saccharomyces cerevisiae C6 zinc cluster factors
MA0367.2 RGT1 Saccharomyces cerevisiae C6 zinc cluster factors
MA0368.1 RIM101 Saccharomyces cerevisiae C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA0369.1 RLM1 Saccharomyces cerevisiae MADS box factors Regulators of differentiation
MA0369.2 RLM1 Saccharomyces cerevisiae MADS box factors Regulators of differentiation
MA0370.1 RME1 Saccharomyces cerevisiae C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA0371.1 ROX1 Saccharomyces cerevisiae High-mobility group (HMG) domain factors
MA0372.1 RPH1 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0372.2 RPH1 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
Showing 10 profiles of page 72 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.