JASPAR CORE

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Total 4572 profiles

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ID Name Species Class Family Sequence logo
MA1474.1 CREB3L4 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
MA1474.2 CREB3L4 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
MA1475.1 CREB3L4 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
MA1475.2 CREB3L4 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
MA1476.1 DLX5 Homo sapiens Homeo domain factors NK
MA1476.2 Dlx5 Mus musculus Homeo domain factors NK
MA1476.3 Dlx5 Mus musculus Homeo domain factors NK
MA1478.1 DMRTA2 Homo sapiens DM-type intertwined zinc finger factors DMRT factors
MA1478.2 DMRTA2 Homo sapiens DM-type intertwined zinc finger factors DMRT factors
MA1479.1 DMRTC2 Homo sapiens DM-type intertwined zinc finger factors DMRT factors
MA1479.2 DMRTC2 Homo sapiens DM-type intertwined zinc finger factors DMRT factors
MA1480.1 DPRX Homo sapiens Homeo domain factors Paired-related HD factors
MA1480.2 DPRX Homo sapiens Homeo domain factors Paired-related HD factors
MA1481.1 DRGX Homo sapiens Homeo domain factors Paired-related HD factors
MA1481.2 DRGX Homo sapiens Homeo domain factors Paired-related HD factors
MA1483.1 ELF2 Homo sapiens Tryptophan cluster factors Ets-related
MA1483.2 ELF2 Homo sapiens Tryptophan cluster factors Ets-related
MA1483.3 ELF2 Homo sapiens Tryptophan cluster factors Ets-related
MA1484.1 ETS2 Homo sapiens Tryptophan cluster factors Ets-related
MA1484.2 ETS2 Homo sapiens Tryptophan cluster factors Ets-related
MA1485.1 FERD3L Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA1487.1 FOXE1 Homo sapiens Fork head/winged helix factors FOX
MA1487.2 FOXE1 Homo sapiens Fork head/winged helix factors FOX
MA1487.3 FOXE1 Homo sapiens Fork head/winged helix factors FOX
MA1489.1 FOXN3 Homo sapiens Fork head/winged helix factors FOX
Showing 25 profiles of page 114 from 183 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.