JASPAR CORE

  1. Home
  2. Collection core

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1568.2 TCF21 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA1569.1 TFAP2E Homo sapiens Basic helix-span-helix factors (bHSH) AP-2
MA1569.2 TFAP2E Homo sapiens Basic helix-span-helix factors (bHSH) AP-2
MA1570.1 TFAP4 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA1571.1 TGIF2LX Homo sapiens Homeo domain factors TALE-type homeo domain factors
MA1572.1 TGIF2LY Homo sapiens Homeo domain factors TALE-type homeo domain factors
MA1573.1 THAP11 Homo sapiens C2CH THAP-type zinc finger factors THAP-related factors
MA1573.2 Thap11 Mus musculus C2CH THAP-type zinc finger factors THAP-related factors
MA1574.1 THRB Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1574.2 THRB Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1575.1 THRB Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1575.2 THRB Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1576.1 THRB Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1576.2 THRB Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1577.1 TLX2 Homo sapiens Homeo domain factors NK
MA1577.2 TLX2 Homo sapiens Homeo domain factors NK
MA1578.1 VEZF1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1578.2 VEZF1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1579.1 ZBTB26 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1579.2 ZBTB26 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1580.1 ZBTB32 Homo sapiens C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA1581.1 ZBTB6 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1581.2 ZBTB6 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1583.1 ZFP57 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1583.2 ZFP57 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
Showing 25 profiles of page 121 from 172 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.