JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0114.3 Hnf4a Mus musculus Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0114.4 HNF4A Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0114.5 HNF4A Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0115.1 NR1H2::RXRA Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
MA0116.1 Znf423 Rattus norvegicus C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA0117.1 Mafb Rattus norvegicus Basic leucine zipper factors (bZIP) Maf-related
MA0117.2 Mafb Mus musculus Basic leucine zipper factors (bZIP) Maf-related
MA0117.3 Mafb Mus musculus Basic leucine zipper factors (bZIP) Maf-related
MA0118.1 Macho-1 Halocynthia roretzi C2H2 zinc finger factors
MA0118.2 Macho-1 Halocynthia roretzi C2H2 zinc finger factors
MA0119.1 NFIC::TLX1 Homo sapiens SMAD/NF-1 DNA-binding domain factors::Homeo domain factors Nuclear factor 1::NK
MA0121.1 ARR10 Arabidopsis thaliana Tryptophan cluster factors GARP_ARR-B
MA0121.2 ARR10 Arabidopsis thaliana Tryptophan cluster factors GARP_ARR-B
MA0122.1 Nkx3-2 Mus musculus Homeo domain factors NK
MA0122.2 NKX3-2 Homo sapiens Homeo domain factors NK
MA0122.3 Nkx3-2 Mus musculus Homeo domain factors NK
MA0122.4 Nkx3-2 Mus musculus Homeo domain factors NK
MA0123.1 abi4 Zea mays AP2/EREBP ERF/DREB
MA0124.1 NKX3-1 Homo sapiens Homeo domain factors NK
MA0124.2 Nkx3-1 Mus musculus Homeo domain factors NK
MA0124.3 Nkx3-1 Mus musculus Homeo domain factors NK
MA0125.1 Nobox Mus musculus Homeo domain factors Paired-related HD factors
MA0125.2 Nobox Mus musculus Homeo domain factors Paired-related HD factors
MA0126.1 ovo Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0126.2 ovo Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
Showing 25 profiles of page 13 from 172 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.