JASPAR CORE

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Total 4572 profiles

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ID Name Species Class Family Sequence logo
MA2110.1 Cdx Ciona intestinalis Homeo domain factors HOX
MA2111.1 HNF4 Ciona intestinalis Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA2112.1 Meis Ciona intestinalis Homeo domain factors TALE-type homeo domain factors
MA2113.1 Pax2-5-8-a Ciona intestinalis Paired box factors Paired domain only
MA2114.1 Pax3-7-like Ciona intestinalis Paired box factors Paired plus homeo domain
MA2115.1 Pax6 Ciona intestinalis Paired box factors Paired plus homeo domain
MA2116.1 Pou4 Ciona intestinalis Homeo domain factors POU domain factors
MA2117.1 FOXP4 Homo sapiens Fork head/winged helix factors FOX
MA2118.1 FOXS1 Homo sapiens Fork head/winged helix factors FOX
MA2119.1 HOXA3 Homo sapiens Homeo domain factors HOX
MA2120.1 ZNF184 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2121.1 ZNF213 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2122.1 Ebf4 Mus musculus Rel homology region (RHR) factors EBF-related
MA2123.1 Hand1 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA2124.1 Hmga1 Mus musculus TATA-binding proteins HMGA
MA2125.1 Zfp809 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2126.1 Zfp961 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2127.1 atf-2 Caenorhabditis elegans Basic leucine zipper factors (bZIP) CEBP-related
MA2128.1 ceh-18 Caenorhabditis elegans Homeo domain factors POU domain factors
MA2129.1 ceh-23 Caenorhabditis elegans Homeo domain factors NK
MA2130.1 dmd-10 Caenorhabditis elegans DM-type intertwined zinc finger factors DMRT factors
MA2131.1 egl-38 Caenorhabditis elegans Paired box factors Paired domain only
MA2132.1 egrh-1 Caenorhabditis elegans C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA2133.1 elt-7 Caenorhabditis elegans Other C4 zinc finger-type factors C4-GATA-related
MA2134.1 end-3 Caenorhabditis elegans Other C4 zinc finger-type factors C4-GATA-related
Showing 25 profiles of page 158 from 183 pages

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Scan

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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