JASPAR CORE

  1. Home
  2. Collection core

Total 4572 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2310.1 fru Drosophila melanogaster C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA2311.1 ftz-f1 Drosophila melanogaster Nuclear receptors with C4 zinc fingers FTZF1-related (NR5A)
MA2312.1 grn Drosophila melanogaster Other C4 zinc finger-type factors C4-GATA-related
MA2313.1 hng1 Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2314.1 hr3 Drosophila melanogaster Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA2315.1 insv Drosophila melanogaster
MA2316.1 l(3)neo38 Drosophila melanogaster C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA2316.2 l(3)neo38 Drosophila melanogaster C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA2317.1 nau Drosophila melanogaster Basic helix-loop-helix factors (bHLH) MyoD/ASC-related factors
MA2318.1 pita Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2319.1 run Drosophila melanogaster Runt domain factors Runt-related factors
MA2320.1 Sox100B Drosophila melanogaster High-mobility group (HMG) domain factors SOX-related factors
MA2321.1 tx Drosophila melanogaster Basic helix-loop-helix factors (bHLH) Tal-related
MA2322.1 ZIPIC Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2323.1 Pgr Rattus norvegicus Nuclear receptors with C4 zinc fingers Steroid hormone receptors (NR3)
MA2324.1 BCL11A Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA2325.1 EPAS1 Homo sapiens Basic helix-loop-helix factors (bHLH) PAS domain factors
MA2326.1 IKZF2 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA2327.1 PGR Homo sapiens Nuclear receptors with C4 zinc fingers Steroid hormone receptors (NR3)
MA2328.1 ZBED4 Homo sapiens C2H2 zinc finger factors BED zinc finger factors
MA2329.1 ZBTB11 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2330.1 ZBTB24 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2330.2 ZBTB24 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2331.1 ZNF157 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2332.1 ZNF175 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
Showing 25 profiles of page 166 from 183 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.